Signal in Depression

Text-mining method identifies glutamate neurotransmission as potential treatment target

The glutamate neurotransmission system may link to depression risk. Illustration courtesy of the National Institute of Mental Health.

Researchers using a new approach to identify genes associated with depression have found that variants in a group of genes involved in transmission of signals by the neurotransmitter glutamate appear to increase the risk of depression. The report, published November 13 in the journal Translational Psychiatry, suggests that drugs targeting the glutamate system may help improve the limited success of treatment with current antidepressant drugs.

“Instead of looking at DNA variations one at a time, we looked at grouping of genes in the same biological pathways and found that a set of genes involved in glutamatergic transmission was associated with the risk of depression,” said Jordan Smoller, HMS associate professor of psychiatry and senior author of the study. “Our findings are particularly interesting in light of recent studies showing that drugs affecting glutamate transmission can have rapid antidepressant effects.”

While the risk of depression clearly runs in families, the genome-wide association studies typically used to identify gene variants that increase disease risk have been unable to find strongly associated genes. The research team—which includes investigators from the Broad Institute of MIT and Harvard and other research centers in the U.S., Australia and the Netherlands—adopted a strategy called gene set pathway analysis.

Starting with a set of genes that previous studies had implicated in depression, they used an analytical process called text mining to scan the medical literature for information on the biological function of these genes. Based on those findings, they identified 178 biological pathways that included these genes. Only the one pathway involved in transmission of neural signals carried by glutamate was significantly associated with the risk for depression.

“Glutamate is the excitatory transmitter most widely used by the central nervous system, and several studies in animals and humans have suggested that it may play a role in depression,” explained Smoller, director of the psychiatric and neurodevelopmental genetics unit in the Massachusetts General Hospital Department of Psychiatry. “Most intriguingly, recent studies have found that ketamine—a drug known to block one glutamate receptor—appears to have antidepressant effects that are much faster than those of traditional antidepressants, which can take several weeks to become effective. Now additional research is needed to confirm these findings and investigate exactly how variation in glutamate function affects brain systems involved in depression.”

The study was supported by grants from the National Institute of Mental Health.

This story was adapted from a Massachusetts General Hospital press release.