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Teasing Out a Tumor Suppressor

PTEN loss and PTEN mutations are not synonymous for cancer patients, new study suggests

By BONNIE PRESCOTT
April 24, 2014

Ever since it was first identified more than 15 years ago, the PTEN gene has been known to play an integral role in preventing the onset and progression of numerous cancers. Consequently, when PTEN is either lost or mutated, malignant cells can grow unchecked and cancer can develop.

Now a team led by investigators at Harvard Medical School and Beth Israel Deaconess Medical Center helps explain more precisely how PTEN exerts its anticancer effects and how its loss or alteration can set cells on a cancerous course. The new study, which reveals that PTEN loss and PTEN mutations are not synonymous, not only provides key insights into basic tumor biology but also offers a potential new direction in the pursuit of new cancer therapies.

The findings are reported online in the April 24 issue of the journal Cell.

Pier Paolo Pandolfi and Antonella Papa. Image: Danielle Duffey, BIDMC Media Services

“By characterizing the ways that two specific PTEN mutations regulate the tumor suppressor function of the normal PTEN protein, our findings suggest that different PTEN mutations contribute to tumorigenesis by regulating different aspects of PTEN biology,” explained senior author Pier Paolo Pandolfi, George C. Reisman Professor of Medicine at HMS and director of the Cancer Center at Beth Israel Deaconess. “It has been suggested that cancer patients harboring mutations in PTEN had poorer outcomes than cancer patients with PTEN loss. Now, using mouse modeling, we are able to demonstrate that this is indeed the case. Because PTEN mutations are extremely frequent in various types of tumors, this discovery could help pave the way for a new level of personalized cancer treatment.”

The PTEN gene encodes the PTEN protein, which acts as a phosphatase, an enzyme that removes phosphates from other substrates. Several of the proteins that PTEN acts upon, both lipids and proteins, are known to promote cancer when bound to a phosphate. Consequently, when PTEN removes their phosphates, it is acting as a tumor suppressor to prevent cancer. When PTEN is mutated, it loses this suppressive ability, and the cancer-promoting proteins are left intact and uninhibited.

This new study unexpectedly shows that the PTEN mutant’s protein is not only functionally impaired (losing its enzymatic function), but it additionally acquires the ability to affect the function of the normal PTEN proteins, thereby gaining a “pro-tumorigenic” function.

“We sought to compare PTEN loss with PTEN mutations,” explained first author Antonella Papa, an HMS research fellow in medicine at Beth Israel Deaconess and an investigator in the Pandolfi laboratory. “We wanted to know, would outcomes differ in cases when PTEN was not expressed compared with cases when PTEN was expressed, but encoded a mutation within its sequence? It turned out the answer was yes.”

The scientific team created several genetically modified strains of mice to mimic the PTEN mutations found in human cancer patients. “All mice [and humans] have two copies of the PTEN gene,” Papa explained. “The genetically modified mice in our study had one copy of the PTEN gene that contained a cancer-associated mutation [either PTEN C124S or PTEN G129E] and one normal copy of PTEN. Other mice in the study had only one copy of the normal PTEN gene, and the second copy was removed.”

The researchers found that the mice with a single mutated copy of PTEN were more tumor-prone than the mice with a deleted copy of PTEN. They also discovered that the mutated protein that was produced by PTEN C124S or PTEN G129E was binding to and inhibiting the PTEN protein made from the normal copy of the PTEN gene.

“This was very surprising, as we were expecting a reduction in tumorigenesis,” said Papa. “Instead, mechanistically, we found that PTEN exists as a dimer [two-protein complex] and in this new conformation, the mutated protein prevents the normal protein from functioning.” At the molecular level, she adds, this generates an increased activation of a PTEN target—a protein called Akt—which is what leads to the augmented tumorigenesis in the mice. Akt is part of a signaling pathway that regulates cell growth, division and metabolism; when PTEN is prevented from inhibiting Akt, the pathway becomes overactive. As a result, say the authors, targeting Akt and its pathway may be an effective treatment strategy for patients with PTEN mutations, adding that inhibitors to affect this pathway are currently being tested and developed.

“This defines a new working model for the function and regulation of PTEN and tells us that PTEN mutational status can be used to determine which cancer patients might benefit from earlier and more radical therapeutic interventions and, ultimately, better prognosis,” noted Pandolfi. “Our findings may help to better identify and stratify patients and their response to treatment based on the different genetic alterations found in the PTEN gene. Importantly, our study shows that cancer therapy should be tailored on the basis of the very specific type of mutations that the tumor harbors. This adds a new layer of complexity but also a new opportunity for precision medicine. I would say that, based on these thorough genetic analyses, this story represents the ultimate example of why personalized cancer medicine is so urgently needed.”

This study was funded, in part, by grants from the National Institutes of Health and fellowship support to Papa from the American-Italian Cancer Foundation.

Adapted from a Beth Israel Deaconess news release.

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